Fig. 5

Characterization of two selection signals encompassing the pigmentation genes. a Log₂(θ_π ratios), F_ST, and Tajima’s D values in 10-kb outlier windows overlapping with KITLG. b The allele frequency of the c.73A > T SNP within KITLG in five domestic goat breeds (CB, JT, TC, MD, and MN) and Bezoar ibexes. c The high pairwise LD between the 13 SNPs upstream of KITLG in TC. d Log₂(θ_π ratios), F_ST, and Tajima’s D values in 10-kb outlier windows encompassing ASIP. e Representative Sanger sequence traces of two alleles at the c.383G > T SNP site within ASIP. f The allele frequency of the c.383G > T SNP within ASIP in the five domestic goat breeds (CB, JT, TC, MD, and MN) and Bezoar ibexes