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Table 3 Estimated effective sample size and autocorrelation in simulated data

From: Performance of Hamiltonian Monte Carlo and No-U-Turn Sampler for estimating genetic parameters and breeding values

True heritabilityMethodESSAutocorrelation
Lag1Lag5Lag10Lag50
0.1GS530.970.930.860.54
HMC910.960.880.790.36
NUTS11960.640.260.100.00
0.3GS2040.930.780.620.08
HMC4130.840.610.39− 0.06
NUTS11920.640.280.110.00
0.5GS2630.930.740.570.05
HMC4620.840.570.37− 0.03
NUTS8330.720.380.180.05
  1. GS Gibbs sampling, HMC Hamiltonian Monte Carlo, NUTS No-U-Turn Sampler
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