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Table 5 Estimated effective sample size and autocorrelation in Duroc pig data

From: Performance of Hamiltonian Monte Carlo and No-U-Turn Sampler for estimating genetic parameters and breeding values

Trait

Method

ESS

Autocorrelation

Lag1

Lag5

Lag10

Lag50

LEA

GS

132

0.96

0.85

0.75

0.30

NUTS

457

0.82

0.57

0.35

0.06

BF

GS

151

0.95

0.83

0.70

0.21

NUTS

886

0.68

0.36

0.17

0.04

  1. BF back fat thickness, LEA loin eye area, ESS effective sample size, GS Gibbs sampling, NUTS No-U-Turn Sampler
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Genetics Selection Evolution

ISSN: 1297-9686