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Table 4 List of genes with significant expression differences in the tibia between hens segregating for markers defining good (n = 8) and poor (n = 8) bone strength

From: An eQTL in the cystathionine beta synthase gene is linked to osteoporosis in laying hens

Log fold change

P value

FDR

Ensembl gene ID

Chr

bp

Associated gene symbol

− 1.76

1.50E−48

1.83E−44

ENSGALG00000016196

1

111,011,709

CBS

− 0.53

1.02E−07

0.00062

ENSGALG00000022808

1

111,336,046

RRP1B

− 0.66

1.00E−06

0.00409

ENSGALG00000016200

1

111,210,236

SIK1

1.92

6.64E−06

0.01966

ENSGALG00000009639

4

24,961,239

DDX60

− 0.72

8.02E−06

0.01966

ENSGALG00000016048

1

108,339,080

PIGP

  1. FDR false discovery rate, Chr chromosome, bp position on the galGal6 build of the starting point of the gene