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Table 4 Functional annotations of variants with significant effects (−log10(P) ≥ 6) located within confidence intervals of the QTL

From: Identification of the ABCC4, IER3, and CBFA2T2 candidate genes for resistance to paratuberculosis from sequence-based GWAS in Holstein and Normande dairy cattle

Functional annotationNormande 0/1Holstein 0/1Holstein 0/1/2Total distinct
Intergenic2611899301384
Intronic11232218303
Upstream234126130
Downstream082426
3′ UTR0255
5′ UTR0022
Synonymous1189
Missense0199
Total40146713221868