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Table 7 Results of the bivariate analyses with genome-wide significance for at least one trait

From: Distinguishing pleiotropy from linked QTL between milk production traits and mastitis resistance in Nordic Holstein cattle

Chr

BP

rsid

Trait1

Trait2

P1

P2

Indication of pleiotropya

1

120470021

rs109519395

MY

FY

4.36E−06

7.66E−11

Yes

5

93945991

rs208248675

MY

FY

3.58E−21

1.33E−38

Yes

7

57287990

rs380779883

MY

FY

4.47E−12

1.63E−17

Yes

14

1802265

rs109234250

MY

FY

3.97E−124

6.43E−200

Yes

14

1802266

rs109326954

MY

FY

3.88E−124

6.69E−200

Yes

15

66103726

rs41775109

MY

FY

0.67E−01

1.85E−09

No

20

31909478

rs385640152

MY

FY

2.65E−13

4.06E−08

Yes

26

20527926

rs453802222

MY

FY

6.44E−08

8.67E−16

Yes

26

37869471

rs458256022

MY

FY

2.33E−09

4.55E−08

Yes

1

63177947

rs42409534

MY

PY

5.55E−07

4.94E−11

Yes

1

120470021

rs109519395

MY

PY

2.57E−06

2.12E−10

Yes

5

93945991

rs208248675

MY

PY

1.90E−21

1.82E−06

Yes

6

88442678

rs211069111

MY

PY

2.09E−01

1.10E−13

No

7

57287990

rs380779883

MY

PY

2.05E−12

9.62E−19

Yes

14

1802265

rs109234250

MY

PY

2.31E−125

1.30E−28

Yes

14

1802266

rs109326954

MY

PY

2.26E−125

1.28E−28

Yes

18

57064406

rs433130247

MY

PY

5.44E−06

1.36E−11

Yes

20

31909478

rs385640152

MY

PY

3.02E−13

1.30E−04

No

26

37869471

rs458256022

MY

PY

2.63E−09

3.75E−11

Yes

1

63177947

rs42409534

FY

PY

2.94E−08

3.06E−11

Yes

1

120470021

rs109519395

FY

PY

7.12E−11

2.62E−10

Yes

5

93945991

rs208248675

FY

PY

1.43E−38

1.08E−06

Yes

6

88442678

rs211069111

FY

PY

4.24E−01

1.37E−13

No

7

57287990

rs380779883

FY

PY

1.52E−17

2.56E−18

Yes

14

1802265

rs109234250

FY

PY

4.65E−201

3.93E−29

Yes

14

1802266

rs109326954

FY

PY

4.85E−201

3.88E−29

Yes

15

66103726

rs41775109

FY

PY

1.59E−09

6.91E−01

No

18

57064406

rs433130247

FY

PY

5.93E−01

1.10E−11

No

26

20527926

rs453802222

FY

PY

1.49E−15

1.85E−06

Yes

26

37869471

rs458256022

FY

PY

5.38E−08

3.29E−11

Yes

5

93953487

rs210234664

MY

MR

1.07E−21

1.60E−03

No

6

88729872

rs109803407

MY

MR

5.65E−14

5.04E−33

Yes

11

88743727

rs380133715

MY

MR

1.33E−01

7.37E−10

No

13

62017506

rs211080099

MY

MR

8.25E−01

4.38E−15

No

14

1793616

rs384957047

MY

MR

1.61E−123

8.06E−06

Yes

14

1802667

–

MY

MR

3.41E−123

8.16E−06

Yes

14

1804647

rs109162116

MY

MR

1.97E−123

8.15E−06

Yes

14

1805963

rs211282745

MY

MR

1.89E−123

8.14E−06

Yes

14

1808145

rs135258919

MY

MR

1.97E−123

8.33E−06

Yes

14

1817975

rs135805021

MY

MR

1.97E−123

9.08E−06

Yes

14

1818125

rs383356863

MY

MR

1.96E−123

9.09E−06

Yes

14

1819475

rs208211113

MY

MR

1.89E−123

9.23E−06

Yes

14

1825125

rs208113678

MY

MR

2.58E−123

1.05E−05

Yes

16

47836093

rs207941573

MY

MR

1.19E−01

5.69E−11

No

16

59908679

rs451830006

MY

MR

4.85E−02

2.93E−10

No

18

43909571

rs464881101

MY

MR

4.84E−01

8.09E−11

No

20

29996719

rs43116343

MY

MR

6.08E−13

2.41E−02

No

26

3771642

–

MY

MR

1.24E−10

4.07E−02

No

  1. aSNPs showing genome-wide significance for at least one of the traits and significance (p < 1.18e-4) for the second trait