Table 1 Main features of copy number variation regions (CNVR) detected in 1036 Murciano-Granadina goats
From: A genome-wide analysis of copy number variation in Murciano-Granadina goats
Summary statistics | Total | Gain | Loss | Gain/loss |
|---|---|---|---|---|
Total length (Mb) | 95.69 | 26.52 | 61.17 | 8 |
Total number of CNVR | 486 | 78 | 353 | 55 |
Number of CNVR (< 10 kb) | 1 | 1 | 0 | 0 |
Number of CNVR (10–50 kb) | 4 | 2 | 1 | 1 |
Number of CNVR (50–100 kb) | 152 | 25 | 113 | 14 |
Number of CNVR (100–500 kb) | 313 | 47 | 227 | 39 |
Number of CNVR (500 kb–1 Mb) | 10 | 0 | 9 | 1 |
Number of CNVR (≥ 1 Mb) | 6 | 3 | 3 | 0 |
Average number of SNPs per CNVR | 5.59 | 9.01 | 5.03 | 4.35 |
Minimum size of CNVR (kb) | 2.04 | 2.04 | 23.2 | 43.1 |
Maximum size of CNVR (kb) | 11,124 | 11,124 | 1629.39 | 534.16 |
Average CNVR size (kb) | 196.89 | 339.99 | 173.28 | 145.49 |
Standard deviation of CNVR size (kb) | 539.35 | 1299.49 | 156.89 | 91.51 |