Genetics Selection Evolution

Table 2 Area under curve from receiver operating curves for resistance to E. tarda in Japanese flounder obtained by pedigree-based BLUP and genomic prediction procedures for three methods of pre-selection of SNPs (Geno1, 2, and 3) for five-fold cross-validation

From: Prediction of genomic breeding values based on pre-selected SNPs using ssGBLUP, WssGBLUP and BayesB for Edwardsiellosis resistance in Japanese flounder

Fold	Pedigree BLUP	Geno1			Geno2			Geno3
Fold	Pedigree BLUP	BayesB	ssGBLUP	WssGBLUP	BayesB	ssGBLUP	WssGBLUP	BayesB	ssGBLUP	WssGBLUP
1st	0.50	0.62	0.63	0.64	0.60	0.64	0.63	0.55	0.63	0.62
2nd	0.54	0.62	0.64	0.64	0.62	0.64	0.64	0.61	0.64	0.64
3rd	0.54	0.57	0.65	0.67	0.52	0.62	0.67	0.54	0.64	0.66
4th	0.57	0.68	0.72	0.74	0.70	0.74	0.73	0.69	0.73	0.72
5th	0.56	0.54	0.62	0.61	0.55	0.62	0.64	0.52	0.60	0.63
Mean	0.54	0.60	0.65	0.66	0.60	0.65	0.66	0.58	0.65	0.65

Back to article page

ISSN: 1297-9686

Contact us

Submission enquiries: helene.hayes@inrae.fr
General enquiries: info@biomedcentral.com