1: 1.58-2.39
|
0.00274
|
FNC
|
EVA1C (1), C1H21orf59 (2), SYNJ1 (3), PAXBP1 (4), C1H21orf62 (5), OLIG1 (6), LOC526226 (7), IFNAR2 (8)
|
Polled phenotype
|
[105]
|
1: 2.25-2.52
|
4.9E − 08
|
SMC
|
URB1 (1), EVA1C (2), MRAP (3), MIS18A (4)
|
Polled phenotype
|
[105]
|
1: 1.14-1.33
|
0.00289
|
SRP
|
CRYZL1 (5), DONSON (4), SON (3), GART (2), DNAJC28 (10)
|
Polled phenotype
|
[105]
|
1: 1.52-2.51
|
1.2E − 05
|
SRP
|
IL10RB (12), IFNAR2 (11), LOC526226 (10), OLIG1 (9), C1H21orf62 (8), PAXBP1 (7), SYNJ1 (6), C1H21orf59 (5), EVA1C (2), URB1 (1), NSBTAG00000023718 (3), MIS18A (4)
|
Polled phenotype
|
[105]
|
2: 71.46-71.66
|
0.00633
|
SRP
|
TMEM37 (1)
|
Disease resistance
|
[94]
|
3: 32.06-32.34
|
0.00325
|
SRC
|
CHIA (2), CHI3L2 (4)
|
Bacterial infection
|
[96, 97]
|
3: 9.23-9.72
|
0.00933
|
SRC
|
DCAF8 (1)
|
Altitude adaptation
|
[88]
|
3: 9.57-9.58
|
0.00933
|
SRC
|
PEA15 (2)
|
RFI
|
[77]
|
3: 54.20-54.22
|
6.8E − 05
|
SHF
|
GBP6 (4)
|
Bacterial infection
|
[103]
|
3: 54.34-54.36
|
6.87E − 05
|
SHF
|
GBP2 (3)
|
RFI
|
[77]
|
3: 54.64-54.68
|
6.8E − 05
|
SHF
|
GBP4 (11)
|
Stature
|
[106]
|
3: 54.25-54.26
|
6.8E − 05
|
SHF
|
GBP5 (2)
|
RFI
|
[77]
|
4: 77.43-77.70
|
0.00202
|
SHF
|
NPC1L1 (5), NUDCD3 (6)
|
Milk yield
|
[107]
|
5: 105.75-106.52
|
2.60e-13
|
FNC
|
KCNA6 (13), NDUFA9 (11), AKAP3 (10), C5H12orf4 (7), RAD51AP1 (6), FGF6 (2), TIGAR (3), CCND2 (4)
|
Body weight
|
[76, 77]
|
CCND2 (4)
|
Stature
|
[78]
|
5: 82.49-82.73
|
2.37e-09
|
FNC
|
PPFIBP1 (2), REP15 (3)
|
Bacterial infection
|
[99, 108]
|
5: 106.15-106.32
|
2.4E − 05
|
SHF
|
FGF6 (2), TIGAR (3), CCND2 (4)
|
Body weight
|
[76]
|
CCND2 (4)
|
Stature
|
[78]
|
5: 9.30-9.56
|
0.00039
|
SMC
|
PPP1R12A (1)
|
Reproduction
|
[109]
|
PPP1R12A (1)
|
Altitude adaptation
|
[85, 86]
|
5: 24.92-25.02
|
8.17E − 05
|
SRC
|
FGD6 (3)
|
RFI
|
[77]
|
6: 37.06-37.27
|
5.7E − 06
|
SHF
|
TIGD2 (2)
|
Bacterial infection
|
[110]
|
6: 37.64-37.72
|
0.01986
|
SHF
|
PYURF (1)
|
Bacterial infection
|
[110]
|
7: 8.40-8.48
|
0.00159
|
SMC
|
CYP4F2 (1)
|
Disease resistance
|
[93, 94]
|
8: 76.23-76.78
|
0.00022
|
SMC
|
AQP3 (5), AQP7 (5)
|
Acclimation
|
[89]
|
11: 25.57-25.83
|
0.00433
|
SHF
|
ZFP36L2 (1)
|
Reproduction
|
[111]
|
12: 83.19-83.37
|
0.00082
|
SMC
|
SLC10A2 (1)
|
Bacterial infection
|
[95]
|
13: 40.38-42.28
|
0.00985
|
SRC
|
FOXA2 (6)
|
Growth traits
|
[63]
|
13: 43.40-43.42
|
0.00474
|
SRC
|
ASB13 (9)
|
RFI
|
[77]
|
13: 42.73-44.04
|
0.00474
|
SRC
|
ACSS1 (7)
|
Milk content
|
[112, 113]
|
14: 53.71-54.81
|
0.00068
|
FNC
|
CSMD3 (1)
|
Body length
|
[80]
|
14: 24.42-25.11
|
2.2E − 10
|
SHF
|
TMEM68 (2), TGS1 (1), LYN (3)
|
Growth traits
|
[114]
|
14: 24.42-25.11
|
2.2E − 10
|
SHF
|
TGS1 (1), LYN (3), RPS20 (4), MOS (5), PLAG1 (6), CHCHD7 (7)
|
Pleiotropic
|
[44, 48, 50, 56, 114]
|
14: 25.35-25.73
|
2.2E − 10
|
SHF
|
IMPAD1 (1)
|
Pleiotropic
|
[51, 64, 66]
|
14: 26.01-26.24
|
0.00031
|
SHF
|
FAM110B (1)
|
Pleiotropic
|
[64]
|
14: 24.00-24.89
|
2.8E − 06
|
SRC
|
XKR4 (1), TMEM68 (2)
|
Growth, feed intake
|
[114]
|
14: 25.50-25.58
|
0.00624
|
SRC
|
IMPAD1 (1)
|
Pleiotropic
|
[64, 115]
|
14: 33.02-33.41
|
0.00513
|
SRC
|
CSPP1 (1)
|
Reproduction
|
[116]
|
14: 33.02-33.41
|
0.00513
|
SRC
|
COPS5 (2)
|
Feed intake
|
[117]
|
14: 32.10-32.63
|
0.00137
|
SRC
|
CRH (1)
|
Growth
|
[60]
|
15: 53.10-54.25
|
5.6E − 05
|
FNC
|
FCHSD2 (1)
|
Milk fat content
|
[70]
|
15: 53.10-54.25
|
5.6E − 05
|
FNC
|
FCHSD2 (1), ARHGEF17 (5), RELT (6)
|
Bacterial infection
|
[92]
|
UCP2 (13)
|
Hypoxia
|
[118]
|
UCP2 (13), UCP3 (14)
|
Milk fat content, carcass quality
|
[71,72,73, 119]
|
15: 53.13-53.80
|
0.00073
|
SMC
|
FCHSD2 (1)
|
Milk fat content
|
[70]
|
15: 53.13-53.80
|
0.00073
|
SMC
|
FCHSD2 (1), ARHGEF17 (4), RELT (5)
|
Bacterial infection
|
[92]
|
15: 53.52-53.67
|
0.00178
|
SRC
|
ARHGEF17 (1), RELT (2)
|
Bacterial infection
|
[92]
|
15: 78.33-78.51
|
0.02265
|
SRP
|
SLC39A13 (1)
|
Stature
|
[120, 121]
|
16: 55.09-55.15
|
0.00963
|
SRC
|
PRDM2 (1)
|
Bacterial infection
|
[77, 99]
|
PRDM2 (1), KDM5B (2)
|
Bacterial infection
|
[98, 99]
|
PRDM2 (1)
|
RFI
|
[77]
|
16: 44.96-45.25
|
0.00299
|
SRP
|
SPSB1 (1)
|
Immune regulation
|
[100, 101]
|
17: 57.91-58.43
|
0.00011
|
SRC
|
HSPB8 (1)
|
Heat and cold stress
|
[122, 123]
|
19: 51.21-51.30
|
0.01373
|
SMC
|
SLC16A3 (1)
|
Altitude adaptation
|
[88]
|
19: 35.10-35.14
|
0.00442
|
SHF
|
GID4 (1), ATPAF2 (2)
|
Milk protein
|
[124]
|
20: 71.49-71.80
|
0.00272
|
SHF
|
CEP72 (3), SLC9A3 (2)
|
Feed efficiency
|
[125]
|
20: 71.65-71.80
|
0.00498
|
SRP
|
SLC9A3 (2), EXOC3 (3)
|
Feed efficiency
|
[125]
|
24: 49.90-49.94
|
0.00205
|
FNC
|
ACAA2 (1)
|
Milk content
|
[126]
|
RFI
|
[72]
|
26: 22.21-23.02
|
0.00021
|
SHF
|
ELOVL3 (1)
|
Milk content
|
[127]
|
NFKB2 (8)
|
Milk content
|
[128]
|