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Table 2 Genes associated with SNPs from the 100 SNPs with the lowest p-value for each feed efficiency trait

From: Gene networks for three feed efficiency criteria reveal shared and specific biological processes

BTA

Gene symbol

Gene name

Trait affecteda

1

CAPN7

Calpain 7

RFI, FE

1

SH3BP5

SH3 domain binding protein 5

RFI

3

INSL5

Insulin like 5

RG

3

TCTEX1D1

Tctex1 domain containing 1

RG

3

ENSBTAG00000030623

 

RG, FE

3

MROH7

Maestro heat like repeat family member 7

RG, FE

5

GUCY2C

Guanylate cyclase 2C

FE

5

SAMM50

SAMM50 sorting and assembly machinery component

FE

10

SLC35F4

Solute carrier family 35 member F4

FE

11

SULT6B1

Sulfotransferase family 6B member 1

RFI

11

NCK2

NCK adaptor protein 2

RG

15

UBQLNL

Ubiquilin like

RG

15

MMP13

Matrix metallopeptidase 13

RFI

16

CACNA1E

Calcium voltage-gated channel subunit alpha1 E

RFI, FE

17

TRIM2

Tripartite motif containing 2

RFI

17

KNTC1

Kinetochore associated 1

RG

18

LOC514658

Bile salt sulfotransferase

FE

18

ENSBTAG00000040054

 

FE

22

GADL1

Glutamate decarboxylase like 1

FE

24

ZNF407

Zinc finger protein 407

FE

27

RBPMS

RNA binding protein

RG

28

CHAT

Choline O-acetyltransferase

RFI

  1. aTrait abbreviations: RFI residual feed intake, RG residual gain, FE feed efficiency ratio