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Table 2 Summary of the statistics of SNPs associated with recombination frequency

From: Male recombination map of the autosomal genome in German Holstein

Chr SNP bp Frequency P-value BF Candidate gene
3 INRA-598 45,930,136 0.21 8.67 × 10−8 0.003  
3 ARS-BFGL-NGS-112152 45,978,363 0.21 1.42 × 10−7 0.006  
3 Hapmap59096-rs29024776 49,181,271 0.21 1.97 × 10−8 0.001 GCLM
3 Hapmap58808-rs29017431 52,452,892 0.20 1.98 × 10−8 0.001  
3 INRA-170 52,783,346 0.20 1.32 × 10−7 0.006  
6 ARS-BFGL-NGS-28350 114,972,434 0.26 1.88 × 10−12 0.000  
6 ARS-BFGL-NGS-18656 115,871,184 0.39 1.28 × 10−9 0.000  
6 ARS-BFGL-NGS-104112 115,942,196 0.30 1.73 × 10−7 0.007  
6 ARS-BFGL-NGS-61359 116,788,648 0.28 2.36 × 10−13 0.000  
6 ARS-BFGL-NGS-10037 117,015,280 0.27 1.50 × 10−16 0.000  
6 ARS-BFGL-NGS-112242 117,124,190 0.29 7.68 × 10−15 0.000  
6 BTB-00284077 117,271,685 0.27 5.18 × 10−15 0.000  
6 ARS-BFGL-NGS-117763 117,368,760 0.29 2.89 × 10−19 0.000  
6 ARS-BFGL-NGS-110507 117,390,034 0.29 1.89 × 10−19 0.000 CPLX1, GAK, PCGF3
10 ARS-BFGL-NGS-99693 17,886,463 0.61 1.09 × 10−7 0.004  
10 Hapmap47676-BTA-61231 21,768,228 0.15 6.75 × 10−8 0.003  
10 ARS-BFGL-NGS-19822 22,284,939 0.42 2.09 × 10−7 0.009  
10 ARS-BFGL-NGS-42815 25,998,000 0.59 1.08 × 10−7 0.004 REC114
10 ARS-BFGL-NGS-118433 26,023,168 0.59 1.08 × 10−7 0.004  
10 BTB-00438757 86,199,353 0.40 1.85 × 10−8 0.001  
10 Hapmap57084-ss46526565 86,260,186 0.40 4.17 × 10−9 0.000  
10 BTB-00438922 86,284,751 0.40 2.05 × 10−7 0.009  
10 BTA-78285-no-rs 86,322,591 0.55 2.68 × 10−9 0.000 NEK9
10 UA-IFASA-7857 86,379,951 0.56 8.37 × 10−8 0.003  
  1. BF: Bonferroni adjusted P-value for multiplicity