Variability in porcine microRNA genes and its association with mRNA expression and lipid phenotypes

Table 1 List of miRNA polymorphisms genotyped in a population of Duroc pigs (N = 345, Lipgen population)

microRNA	SSC^a	Start (bp)	End (bp)	Strand	SNP	Type	Alt. allele^b	Frequency^c
ssc-miR-339	1	164,025,972	164,026,057	−	rs81349391	Apical loop	G	0.4138
ssc-miR-130a	2	13,296,695	13,296,773	−	rs344472188	Apical loop	G	0.1364
ssc-miR-23a	2	65,308,117	65,308,186	+	rs333787816	Precursor stem	C	0.5398
ssc-miR-30d	4	6,948,669	6,948,747	+	rs340704946	Precursor stem	G	0.4762
ssc-miR-371	6	56,427,208	56,427,285	−	rs320008166	Precursor stem	C	0.2955
ssc-miR-429	6	63,491,921	63,492,001	+	rs323906663	Precursor stem	A	0.2955
ssc-miR-326	9	9,581,944	9,582,034	−	rs319154814	Apical loop	A	0.5852
ssc-miR-34c	9	39,280,278	39,280,357	+	rs321151601	Mature region	A	0.0805
ssc-miR-378–2	12	36,947,443	36,947,510	+	rs341950320	Precursor stem	A	0.1176
ssc-miR-15b	13	100,083,172	100,083,269	+	rs334680106	Precursor stem	T	0.2706
ssc-miR-486	17	10,758,818	10,758,899	−	rs335924546	Precursor stem	T	0.3391
ssc-miR-335	18	18,341,568	18,341,659	−	rs334590580	Precursor stem	C	0.1875

ISSN: 1297-9686