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Fig. 6 | Genetics Selection Evolution

Fig. 6

From: Variants at the ASIP locus contribute to coat color darkening in Nellore cattle

Fig. 6

Oxford Nanopore Technologies long read alignments spanning ASIP-SV1 in Brahman cattle. a To improve visualization, the sequences were first aligned to a modified ARS-UCD1.2 assembly where the CHR13:63,599,803–63,600,957 segment was deleted. Wild type sequences are displayed as more than 1.1-kb insertions, whereas mutant sequences are displayed as insertions ranging from 162 to 173 bp (variation likely due to ONT sequencing errors). The only ONT read that mapped to the deletion position in the wild type animal was verified to be an alignment artifact (data not shown). b The long reads were further mapped to a modified ARS-UCD1.2 sequence that contained both the deletion and insertion of the reverse complement of CHR13:63,283,374–63,283,523

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