Skip to main content

Table 1 Effects of the variants (SNVs and INDEL) identified in the genomic regions with true signatures of selection for VE of LS

From: Selection for environmental variance of litter size in rabbits involves genes in pathways controlling animal resilience

Effect

Total

Upstream

10,925

Downstream

10,309

Intergenic

122,789

3ʹUTR

434

5ʹUTR

170

Intron

81,536

Splicing

156

Synonymous

657

Missense

368

Frameshift

38

Inframe

20

ncRNA exon

443

Stop gained

8

Start lost

2

  1. A variant can affect more than one gene because they can share their DNA sequence, thus although the total number of variants identified was equal to 212,845, a total of 227,855 effects were found