Table 2 Scenarios used to evaluate sensitivity of predictive accuracy to the number of causative OTU
From: Opportunities and limits of combining microbiome and genome data for complex trait prediction
Scenario | Abbreviation | \({\varvec{N}}_{{{\varvec{QTN}}}}\) | \({\varvec{N}}_{{{\varvec{OTU}}}}\) | \({\varvec{N}}_{{{\varvec{OTU}}\left( {\varvec{g}} \right)}}\) | \(r^{2}\) | \(h^{2}\) | \(b^{2}\) |
|---|---|---|---|---|---|---|---|
Joint | J10 | 100 | 10 | 0 | 0.50 | 0.25 | 0.25 |
J100 | 100 | 100 | 0 | 0.50 | 0.25 | 0.25 | |
J250 | 100 | 250 | 0 | 0.50 | 0.25 | 0.25 | |
Recursive | R10 | 100 | 10 | 5 | 0.50 | 0.25 | 0.25 |
R100 | 100 | 100 | 50 | 0.50 | 0.25 | 0.25 | |
R250 | 100 | 250 | 125 | 0.50 | 0.25 | 0.25 |