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Table 3 Statistical models used to analyze the data

From: Opportunities and limits of combining microbiome and genome data for complex trait prediction

Method

Abbreviation

Effects fitted

\({\varvec{g}}\)

\({\varvec{b}}\)

\({\varvec{g}} \times {\varvec{b}}\)

Bayesian RKHS (GBLUP)

Rgbx

x

x

x

Rgb

x

x

-

Rg

x

-

-

Rb

-

x

-

Bayes C

Cgb

x

x

-

Cg

x

-

-

Cb

-

x

-

  1. Effects included can be \(g\) (SNP genotypes), \(b\) (OTU abundances) and their interaction \(g \times b\)