Fig. 1

Observed prediction accuracy of the best haplotype model relative to the best SNP model for predicting phenotypic values of each trait from ten-fold validations. a Observed prediction accuracy using the original phenotypic values of the validation populations. b Observed prediction accuracy using the corrected phenotypic values of the validation populations. The error bar is one standard deviation above and below the average prediction accuracy, where standard deviation was calculated from tenfold validations. AGW age at 100 kg live weight, ADG daily gain during, BJS body judging score, FCR Feed conversion ratio, LMA loin muscle area at 100 kg, LMD loin muscle depth at 100 kg, BF back fat thickness at 100 kg, TN teat number