| Trait | |||||||
---|---|---|---|---|---|---|---|---|
AGW | ADG | BJS | FCR | LMA | LMD | BF | TN | |
SNP model with additive values (A) | ||||||||
 Additive heritability \({(\hat{\text{h}}}{_{{\upalpha }1}^{2}})\) | 0.182 | 0.186 | 0.078 | 0.142 | 0.327 | 0.315 | 0.300 | 0.297 |
SNP model with additive and dominance values (A + D) | ||||||||
 Additive heritability \({(\hat{\text{h}}}{_{{\upalpha }2}^{2}})\) | 0.173 | 0.179 | 0.076 | 0.139 | 0.327 | 0.309 | 0.299 | 0.293 |
 Dominance heritability \({(\hat{\text{h}}}{_{\updelta }^{2}})\) | 0.045 | 0.038 | 0.048 | 0.036 | 0.000 | 0.027 | 0.028 | 0.037 |
 SNP broad-sense heritability \({(\hat{\text{h}}}{_{\text{s}}^{2}})\) | 0.218 | 0.216 | 0.124 | 0.175 | 0.327 | 0.336 | 0.326 | 0.331 |
Haplotype prediction models | ||||||||
 Best model | H | H | H | D + H | H | A + D + H | A + D + H | A + D + H |
 Best haplotype blocking method | 500 Kb | 500 Kb | 100 Kb | 1 Mb | Genes | Genes | 1 Mb | Genes |
 Accuracy increase (%) | 7.14 | 6.56 | 7.36 | 4.95 | 2.74 | 1.92 | 1.29 | 0.25 |
 SNP additive heritability \({(\hat{\text{h}}}{_{{\upalpha} {\text{s}}}^{2}})\) | – | – | – | – | – | 0.101 | 0.154 | 0.137 |
 SNP dominance heritability \({(\hat{\text{h}}}{_{{\updelta} {\text{s}}}^{2}})\) | – | – | – | 0.036 | – | 0.026 | 0.022 | 0.037 |
 Haplotype additive heritability \({(\hat{\text{h}}}{_{{\upalpha} {\text{h}}}^{2}})\) | 0.208 | 0.213 | 0.097 | 0.170 | 0.336 | 0.215 | 0.183 | 0.162 |
 Total heritability \({(\hat{\text{h}}}{_{\text{g}}^{2}})\) | 0.208 | 0.213 | 0.097 | 0.206 | 0.336 | 0.343 | 0.359 | 0.336 |
Estimates of haplotype epistasis heritability | ||||||||
 Haplotype epistasis heritability \({(\hat{\text{h}}}{_{\text{g}}^{2}})\) | 0.026 | 0.027 | 0.019 | 0.031 | 0.009 | 0.007 | 0.033 | 0.005 |
 Relative haplotype epistasis heritability \({(\hat{\text{h}}}{_{\text{Er}}^{2}}, \%)\) | 14.29 | 14.52 | 24.36 | 22.30 | 2.75 | 2.26 | 11.04 | 1.71 |