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Table 1 Comparison of chromosome lengths, gaps and telomere lengths between the Saanen_v1 and ARS1 genome assemblies

From: A near complete genome for goat genetic and genomic research

Chr Saanen_v1 ARS1
Ungapped length (bp) Gap number Telomere length (bp) Ungapped length (bp) Gap number Telomere length (bp)
1 157,026,289 12 9940 157,403,278 10 0
2 136,815,899 4 0 136,510,747 8 0
3 122,007,170 4 0 120,037,984 11 0
4 121,353,546 4 0 120,733,315 7 0
5 119,111,638 5 0 119,019,111 12 0
6 118,192,308 2 13,717 117,637,248 15 0
7 108,721,103 4 11,502 108,433,436 8 5318
8 114,262,317 5 13,891 112,671,558 11 0
9 92,377,540 1 7926 91,568,381 8 5195
10 102,383,334 7 14,353 101,087,335 9 24,448
11 106,922,721 12 16,286 106,224,777 9 0
12 88,153,514 6 18,575 87,276,782 18 0
13 83,177,721 5 6611 83,032,465 9 0
14 94,829,756 1 11,734 94,672,533 8 0
15 83,141,260 4 11,585 81,900,668 12 0
16 80,964,695 4 2424 79,367,392 12 0
17 73,078,104 0 10,066 71,136,580 9 0
18 67,211,768 4 4767 67,274,927 20 4698
19 62,759,990 3 12,832 62,516,200 10 2180
20 72,063,028 4 14,488 71,782,370 5 2421
21 70,281,929 3 5029 69,423,070 13 0
22 60,513,250 2 5029 60,280,842 8 0
23 52,518,510 6 18,806 48,866,424 5 2053
24 62,595,921 1 8188 62,310,016 2 0
25 43,127,748 3 14,990 42,858,159 14 0
26 51,538,664 1 16,511 51,421,353 8 0
27 44,839,895 0 0 44,708,984 2 0
28 44,621,055 0 0 44,672,302 0 0
29 51,316,256 1 18,141 51,332,371 13 0
X 142,335,304 37 5497 115,936,137 214 0
Y 9,603,805 24 5310
Sum 2,637,846,038 169 278,198 2,582,096,745 490 46,313
  1. The ungapped length was calculated for each sequence by excluding gap regions which were represented by Ns