Table 1 Comparison of chromosome lengths, gaps and telomere lengths between the Saanen_v1 and ARS1 genome assemblies
From: A near complete genome for goat genetic and genomic research
Chr | Saanen_v1 | ARS1 | ||||
|---|---|---|---|---|---|---|
Ungapped length (bp) | Gap number | Telomere length (bp) | Ungapped length (bp) | Gap number | Telomere length (bp) | |
1 | 157,026,289 | 12 | 9940 | 157,403,278 | 10 | 0 |
2 | 136,815,899 | 4 | 0 | 136,510,747 | 8 | 0 |
3 | 122,007,170 | 4 | 0 | 120,037,984 | 11 | 0 |
4 | 121,353,546 | 4 | 0 | 120,733,315 | 7 | 0 |
5 | 119,111,638 | 5 | 0 | 119,019,111 | 12 | 0 |
6 | 118,192,308 | 2 | 13,717 | 117,637,248 | 15 | 0 |
7 | 108,721,103 | 4 | 11,502 | 108,433,436 | 8 | 5318 |
8 | 114,262,317 | 5 | 13,891 | 112,671,558 | 11 | 0 |
9 | 92,377,540 | 1 | 7926 | 91,568,381 | 8 | 5195 |
10 | 102,383,334 | 7 | 14,353 | 101,087,335 | 9 | 24,448 |
11 | 106,922,721 | 12 | 16,286 | 106,224,777 | 9 | 0 |
12 | 88,153,514 | 6 | 18,575 | 87,276,782 | 18 | 0 |
13 | 83,177,721 | 5 | 6611 | 83,032,465 | 9 | 0 |
14 | 94,829,756 | 1 | 11,734 | 94,672,533 | 8 | 0 |
15 | 83,141,260 | 4 | 11,585 | 81,900,668 | 12 | 0 |
16 | 80,964,695 | 4 | 2424 | 79,367,392 | 12 | 0 |
17 | 73,078,104 | 0 | 10,066 | 71,136,580 | 9 | 0 |
18 | 67,211,768 | 4 | 4767 | 67,274,927 | 20 | 4698 |
19 | 62,759,990 | 3 | 12,832 | 62,516,200 | 10 | 2180 |
20 | 72,063,028 | 4 | 14,488 | 71,782,370 | 5 | 2421 |
21 | 70,281,929 | 3 | 5029 | 69,423,070 | 13 | 0 |
22 | 60,513,250 | 2 | 5029 | 60,280,842 | 8 | 0 |
23 | 52,518,510 | 6 | 18,806 | 48,866,424 | 5 | 2053 |
24 | 62,595,921 | 1 | 8188 | 62,310,016 | 2 | 0 |
25 | 43,127,748 | 3 | 14,990 | 42,858,159 | 14 | 0 |
26 | 51,538,664 | 1 | 16,511 | 51,421,353 | 8 | 0 |
27 | 44,839,895 | 0 | 0 | 44,708,984 | 2 | 0 |
28 | 44,621,055 | 0 | 0 | 44,672,302 | 0 | 0 |
29 | 51,316,256 | 1 | 18,141 | 51,332,371 | 13 | 0 |
X | 142,335,304 | 37 | 5497 | 115,936,137 | 214 | 0 |
Y | 9,603,805 | 24 | 5310 | – | – | – |
Sum | 2,637,846,038 | 169 | 278,198 | 2,582,096,745 | 490 | 46,313 |