|
QTLR
|
OAR
|
Range (bp)
|
nSNP
|
Pos (bp)
|
\(- \log_{10} \left( {{Pvalue}} \right)\)
|
\({\raise0.7ex\hbox{${\widehat{{{\boldsymbol{\sigma}}_{{{\varvec{qtlS}}}}^{2} }}}$} \!\mathord{\left/ {\vphantom {{\widehat{{{\boldsymbol{\sigma}}_{{{\varvec{qtlS}}}}^{2} }}} {{\boldsymbol{\sigma}}_{{{\varvec{APD}}}}^{2} }}}\right.\kern-\nulldelimiterspace} \!\lower0.7ex\hbox{${{\boldsymbol{\sigma}}_{{{\varvec{APD}}}}^{2} }$}}\)
|
|---|
|
Q_01_1
|
1
|
99,988,914–99,988,914
|
1
|
99,988,914
|
6.256
|
0.0087
|
|
Q_02_1
|
2
|
135,598,790–135,598,790
|
1
|
135,598,790
|
6.078
|
0.0093
|
|
Q_02_2
|
2
|
213,089,849–213,166,468
|
3
|
213,135,270
|
6.554
|
0.0093
|
|
Q_04_1
|
4
|
5,252,005–9,837,812
|
6
|
5,386,849
|
7.404
|
0.0111
|
|
Q_06_1
|
6
|
12,638,149–12,695,314
|
3
|
12,695,314
|
6.864
|
0.0099
|
|
Q_07_1
|
7
|
88,040,710–88,085,726
|
2
|
88,040,710
|
6.762
|
0.0098
|
|
Q_12_1
|
12
|
35,973,543–41,153,795
|
19
|
39,430,517
|
9.191
|
0.0125
|
|
Q_15_1
|
15
|
34,024,406–34,081,200
|
2
|
34024406
|
7.362
|
0.0110
|
|
Q_19_1
|
19
|
18,933,658–31,429,916
|
11
|
18,983,777
|
7.302
|
0.0104
|
|
Q_20_1
|
20
|
16,796,770–36,098,292
|
154
|
21,170,858
|
12.861
|
0.0176
|
- QTLR: QTL region identifier; OAR Ovis aries autosome; Range: position, in bp from the ovine genome assembly v4.0, of the first and last significant SNP of the QTL region; nSNP number of SNPs from the OvineSNP50 Beadchip exceeding the 0.05 genome-wide significance threshold \(- {\text{log}}_{10} \left( {Pvalue} \right) > 6\); Pos: position of the most significant SNP in bp; \(- {\text{log}}_{10} \left( {Pvalue} \right)\): negative logarithm of the p-value of the most significant SNP; \({\raise0.7ex\hbox{${\widehat{{\sigma_{qtlS}^{2} }}}$} \!\mathord{\left/ {\vphantom {{\widehat{{\sigma_{qtlS}^{2} }}} {\widehat{{\sigma_{APD}^{2} }}}}}\right.\kern-\nulldelimiterspace} \!\lower0.7ex\hbox{${\widehat{{\sigma_{APD}^{2} }}}$}}\): ratio between the ANOVA estimator of the QTL variance at peak position (\(\widehat{{\sigma_{qtlS}^{2} }}\)) and the total phenotypic variance of the pseudo-phenotypes (\(\widehat{{\sigma_{APD}^{2} }}\))
