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Table 4 Description of the QTL regions from whole-genome sequences and results of the imputation procedure

From: Association analysis and functional annotation of imputed sequence data within genomic regions influencing resistance to gastro-intestinal parasites detected by an LDLA approach in a nucleus flock of Sarda dairy sheep

QTLR Interval IC Accuracy
Range (Mb) nSNPsa MR (nSNPs/Mb) Mean ± SD nSNPsb Mean ± SD
Q_01_1 99–100 15,410 7711 0.983 ± 0.017 33 0.983 ± 0.026
Q_02_1 135–137 21,708 10,859 0.973 ± 0.015 39 0.986 ± 0.009
Q_02_2 212–214 24,361 12,181 0.982 ± 0.013 35 0.995 ± 0.004
Q_04_1 4–10 86,568 14,428 0.967 ± 0.020 113 0.987 ± 0.011
Q_06_1 12–14 26,466 13,234 0.973 ± 0.014 40 0.990 ± 0.005
Q_07_1 87–89 26,375 13,188 0.974 ± 0.016 43 0.979 ± 0.034
Q_12_1 35–42 54,785 7827 0.985 ± 0.014 119 0.995 ± 0.006
Q_15_1 33–35 21,528 10,764 0.972 ± 0.018 34 0.986 ± 0.009
Q_19_1 18–32 167,487 11,963 0.972 ± 0.019 222 0.987 ± 0.017
Q_20_1 16–37 268,299 12,778 0.976 ± 0.021 365 0.987 ± 0.028
Total 712,987 11,884 0.976 ± 0.017 1043 0.988 ± 0.021
  1. QTLR: QTL region identifier; Range: start and end position of the explored interval in Mb from the ovine genome assembly v4.0; nSNPa: number of polymorphic sites from sequence data; MR: mutation rate, i.e. number of SNPs per Mb; nSNPb: number of polymorphic sites from both the OvineSNP50 Beadchip and sequence data used for calculating the accuracy of imputation; IC: information content and Accuracy: accuracy of imputation of gametes carried by phenotyped ewes