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Table 2 Overview of the investigated rabbit breeds and related population parameters

From: Genomic diversity and signatures of selection in meat and fancy rabbit breeds based on high-density marker data

Breed

MAF (sd)

Ho (sd)

He (sd)

FIS (sd)

M1-FST (sd)

M2-FST (sd)

Ne

Meat breeds

 Italian Silver

0.23 (0.15)

0.35 (0.19)

0.34 (0.16)

− 0.03

0.14 (0.08)

0.23 (0.22)

35

 Italian Spotted

0.23 (0.15)

0.34 (0.18)

0.33 (0.17)

− 0.01

0.12 (0.08)

0.23 (0.22)

43

 Italian White

0.27 (0.15)

0.36 (0.16)

0.36 (0.15)

− 0.01

0.09 (0.07)

0.21 (0.20)

94

Fancy breeds

 Belgian Hare

0.20 (0.16)

0.34 (0.22)

0.32 (0.19)

− 0.06

0.20 (0.13)

0.28 (0.26)

46

 Burgundy Fawn

0.18 (0.16)

0.41 (0.26)

0.35 (0.19)

− 0.15

0.23 (0.13)

0.29 (0.27)

17

 Champagne d’Argent

0.19 (0.17)

0.33 (0.21)

0.32 (0.19)

− 0.01

0.21 (0.13)

0.27 (0.26)

34

 Checkered Giant

0.24 (0.16)

0.34 (0.17)

0.33 (0.16)

− 0.01

0.13 (0.09)

0.22 (0.21)

86

 Coloured Dwarf

0.25 (0.17)

0.29 (0.16)

0.35 (0.15)

0.17

0.14 (0.09)

0.22 (0.21)

54

 Dwarf Lop

0.26 (0.16)

0.31 (0.17)

0.36 (0.16)

0.12

0.14 (0.09)

0.22 (0.21)

50

 Ermine

0.18 (0.16)

0.28 (0.19)

0.31 (0.18)

0.09

0.23 (0.13)

0.28 (0.27)

33

 Giant Grey

0.24 (0.15)

0.35 (0.19)

0.35 (0.16)

− 0.01

0.13 (0.09)

0.22 (0.21)

63

 Giant White

0.24 (0.16)

0.35 (0.20)

0.34 (0.17)

− 0.02

0.14 (0.09)

0.22 (0.21)

43

 Rex

0.25 (0.15)

0.32 (0.19)

0.35 (0.16)

0.08

0.14 (0.09)

0.22 (0.21)

40

 Rhinelander

0.22 (0.17)

0.35 (0.21)

0.33 (0.18)

− 0.05

0.17 (0.11)

0.26 (0.24)

42

 Thuringian

0.21 (0.16)

0.40 (0.25)

0.35 (0.19)

− 0.13

0.20 (0.12)

0.26 (0.25)

24

  1. MAF: average minor allele frequency (standard deviation); Ho: observed Heterozygosity (standard deviation); He: expected Heterozygosity (standard deviation); FIS: inbreeding coefficient individual (I) relative to the subpopulation (S), (sd: standard deviation); A M1-FST: average FST value computed by using Method 1 (standard deviation); A M2-FST: average FST value computed by using Method 2 (standard deviation); Ne: effective population size at the most recent generation (generation 13)