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Table 2 Phenotypic summary of genera and alpha diversity indices

From: Use of Bayes factors to evaluate the effects of host genetics, litter and cage on the rabbit cecal microbiota

Trait

Mean

SD

Genus Methanobrevibacter, %

0.19

0.23

Genus Adlercreutzia, %

0.95

0.43

Genus Bacteroides, %

1.65

0.76

Genus Parabacteroides, %

0.21

0.18

Genus Rikenella, %

0.35

0.24

Genus Butyricimonas, %

0.20

0.19

Genus Odoribacter, %

0.27

0.22

Genus Clostridium, %

1.05

0.26

Genus Dehalobacterium, %

0.08

0.09

Genus Anaerofustis, %

0.11

0.07

Genus Anaerostipes, %

0.16

0.08

Genus Blautia, %

2.94

0.65

Genus Butyrivibrio, %

0.11

0.07

Genus Coprococcus, %

2.02

0.42

Genus Dorea, %

0.47

0.12

Genus Epulopiscium, %

0.11

0.11

Genus Ruminococcus, %

0.16

0.07

Genus rc4-4, %

0.15

0.07

Genus Faecalibacterium, %

0.20

0.05

Genus Oscillospira, %

2.26

0.58

Genus Phascolarctobacterium, %

0.21

0.24

Genus Coprobacillus, %

0.19

0.24

Genus p-75-a5, %

0.10

0.07

Genus Oxalobacter, %

0.11

0.06

Genus Desulfovibrio, %

0.46

0.31

Genus Campylobacter, %

0.07

0.08

Genus Ruminococcus, %

4.32

0.85

Genus Anaeroplasma, %

0.20

0.17

Genus Akkermansia, %

1.47

0.50

Number of OTU observed

551.05

91.94

Shannon

5.07

0.30

Simpson

0.98

0.01

Simpson’s inverse

71.01

20.20

  1. SD: standard deviation