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Fig. 4 | Genetics Selection Evolution

Fig. 4

From: Assessment of genotyping array performance for genome-wide association studies and imputation in African cattle

Fig. 4

Imputation accuracy (dosage R2) when imputing from bovine array variants to WGS level, using the Global Reference Panel (i.e., 289 individuals). The target sets were created by retaining the WGS genotypes that overlapped with the variants of each of the 23 available bovine genotyping arrays from the Global Reference Panel (i.e., Global target set, with 289 individuals). Results are presented only for 16 arrays (i.e., those retaining more than 10,000 variants after QC), for which imputation was successful. Dosage R2 is only calculated for the variants that are not on the array

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Genetics Selection Evolution

ISSN: 1297-9686