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Table 3 Number of significant variants from the whole-genome sequence data that were added to the marker array to create the ChipPlusSign set of variants

From: Genomic prediction with whole-genome sequence data in intensely selected pig lines

Trait

A

B

C

D

E

F

G

Multi-line

ADG

646

581

424

498

279

219

143

4731

BFT

1083

758

664

518

1030

218

237

6149

LD

633

579

458

518

222

215

43

7247

ADFI

145

224

169

23

183

–

119

767

FCR

198

224

162

95

56

–

134

1369

TNB

71

117

161

–

–

–

–

248

LWW

–

32

73

–

–

–

–

480

RET

–

184

31

–

–

–

–

60

  1. ADG average daily gain, BFT backfat thickness, LD loin depth, ADFI average daily feed intake, FCR feed conversion ratio, TNB total number of piglets born, LWW litter weight at weaning, RET return to oestrus 7 days after weaning