Cost-effectively dissecting the genetic architecture of complex wool traits in rabbits by low-coverage sequencing

Table 1 QTL mapping and the 95% confidence interval (95%CI) of each QTL

Trait	QTL	Chr	95% CI		95% CI width	Top SNP	Allele 0	Allele 1	MAF	P	Number of annotated genes^a
DFW	QTL1	7	138,910,411	139,598,335	687,925	138,975,863	T	C	0.053963	1.36 × 10^–7	2
DFW	QTL2	11	64,944,841	64,952,273	7433	64,951,174	G	C	0.071669	7.12 × 10^–23	2
CVDFW	QTL1	11	64,270,630	65,432,659	1,162,030	65,412,003	A	T	0.079723	1.42 × 10^–11	6
BW	QTL1	2	8,257,045	8,923,024	665,980	8,877,739	G	A	0.174952	7.33 × 10^–12	4
	QTL2	4	36,704,911	38,161,753	1,456,843	38,127,528	A	G	0.083174	5.93 × 10^–7	61
	QTL3	12	148,360,582	148,642,693	282,112	148,369,145	G	A	0.083174	4.61 × 10^–7	3

^aQTL for DFW contained no genes, and the nearest genes in the flanking regions were annotated

ISSN: 1297-9686