Whole‐genome sequencing identifies interferon-induced protein IFI6/IFI27-like as a strong candidate gene for VNN resistance in European sea bass

Table 2 QTL regions identified in the GWAS, ranked by their position on the genome

QTL-ID	LG	Start (bp)	End (bp)	PIP	logBF	Population
LG1A_QTL	LG1A	10,107,908	10,111,686	0.02	10.3	pop A
LG1B_QTL	LG1B	13,152,351	13,885,885	0.04	10.9	pop B
LG3_QTL	LG3	10,137,843	10,137,843	0.03	10.6	pop A
LG4_QTL	LG4	23,334,300	23,618,451	0.22	15.2	pop A
LG7_QTL_1	LG7	7,828,421	7,828,421	0.03	10.6	pop B
LG7_QTL_2	LG7	21,062,741	21,062,741	0.03	10.9	pop A
LG8_QTL_1	LG8	1,423,728	3,198,660	0.38	16.4	pop A/pop B
LG8_QTL_2	LG8	20,789,708	22,055,049	0.05	12	pop A
LG9_QTL	LG9	4,532,879	6,335,544	0.18	14.4	pop B
LG12_QTL_1	LG12	4,717,307	7,246,406	0.2	14.6	pop A/pop B
LG12_QTL_2	LG12	8,671,217	8,797,942	0.59	18.5	pop A/pop B
LG12_QTL_3	LG12	9,118,505	9,821,502	0.36	16.2	pop A/pop B
LG12_QTL_4	LG12	12,167,000	19,133,722	0.3	16	pop A/pop B
LG13_QTL	LG13	11,019,998	11,019,998	0.15	14	pop B
LG14_QTL	LG14	26,274,292	26,276,196	0.07	12.1	pop B
LG15_QTL	LG15	5,885,758	5,885,758	0.04	11	pop B
LG15_QTL	LG15	24,678,361	24,678,361	0.07	12.3	pop B
LG22-25_QTL	LG22-25	4,185,377	4,185,377	0.03	10.5	pop A

TL-ID QTL identifiers, LG linkage group, bp base pair, PIP posterior inclusion probability, logBF logarithm of Bayes Factor, Population population identification of the QTL region

ISSN: 1297-9686