Figure 2

Effects and significance for cattle hip height data. Beef cattle hip height, estimated effects (A, C and E, in cm) and minus the log p-value (MLP, B, D and F) for 1000 randomly chosen SNP and for those with p-values less than 1E-4; effects or significance levels estimated using least squares regression of individual phenotype on genotype are on the X-axis, effects or significance levels estimated using logistic regression of pooled genotype on phenotype data are on the Y-axis; effects were estimated across breeds (A and B), within the Tropical composite breed (C and D) and within the Brahman breed (E and F).