From: Epistatic interactions between at least three loci determine the “rat-tail” phenotype in cattle
Trait | Modela | Marker | BTA | Position (bp) | p value | q valueb |
---|---|---|---|---|---|---|
Level of coat colour dilution | Case–control | Hapmap44614-BTA-72802 | 5 | 21,114,508 | 8.90E−07 | 0.033 |
Level of coat colour dilution | Case–control | Hapmap53597-rs29010787 | 5 | 19,015,523 | 1.15E−06 | 0.043 |
Level of coat colour dilution | Case–control | BTA-74302-no-rs | 5 | 18,047,140 | 1.22E−06 | 0.046 |
Hair length variation | Case–control | BTA-74302-no-rs | 5 | 18,047,140 | 1.74E−07 | 0.007 |
Hair length variation | Case–control | Hapmap42402-BTA-103350 | 5 | 21,484,201 | 2.69E−07 | 0.010 |
Hair length variation | Case–control | Hapmap44614-BTA-72802 | 5 | 21,114,508 | 1.04E−06 | 0.039 |
Hair length variation | Case–control | ARS-BFGL-NGS-26310 | 5 | 12,123,561 | 1.17E−06 | 0.044 |
RTS classification phenotype | Case–control | Hapmap44614-BTA-72802 | 5 | 21,114,508 | 9.03E−07 | 0.033 |
RTS classification phenotype | Case–control | Hapmap53597-rs29010787 | 5 | 19,015,523 | 1.14E−06 | 0.043 |
RTS classification phenotype | Case–control | BTA-74302-no-rs | 5 | 18,047,140 | 1.17E−06 | 0.044 |
Hair length variation | Mixed | BTA-74302-no-rs | 5 | 18,047,140 | 7.36E−09 | 0.0003 |
Hair length variation | Mixed | ARS-BFGL-NGS-26310 | 5 | 12,123,561 | 1.68E−07 | 0.006 |
Hair length variation | Mixed | BTA-103542-no-rs | 5 | 16,795,347 | 1.84E−07 | 0.007 |
RTS classification phenotype | Mixed | BTA-74302-no-rs | 5 | 18,047,140 | 3.43E−08 | 0.001 |
RTS classification phenotype | Mixed | Hapmap42402-BTA-103350 | 5 | 21,484,201 | 8.16E−07 | 0.030 |