Table 2 Log-likelihood, residual variance (\({\varvec{\upsigma}}_{{\mathbf{e}}}^{2}\)), additive variance (\({\varvec{\upsigma}}_{{\mathbf{a}}}^{2}\)) and intercept (\({\varvec{\upmu}}\)) using simulated data and different methods
From: Study of the optimum haplotype length to build genomic relationship matrices
Method | Log-likelihood | \({\varvec{\upsigma}}_{{\mathbf{e}}}^{2}\) | \({\varvec{\upsigma}}_{{\mathbf{a}}}^{2}\) | \({\varvec{\upmu}}\) |
|---|---|---|---|---|
\({\mathbf{G}}\) | −74.459 | 36.965 | 42.377 | −5.050 |
\({\mathbf{H}}_{1,1}\) | −74.459 | 37.008 | 88.654 | −5.106 |
\({\mathbf{G}}_{{\mathbf{u}}}\) | −74.459 | 37.007 | 42.377 | −5.106 |