Table 6 Window sizes for the best log-likelihood and accuracies using real datasets (mean ± SD)
From: Study of the optimum haplotype length to build genomic relationship matrices
Trait | Method | DW-AC | DW-LL | SW-AC | SW-LL | TMS-AC | TMS-LL |
|---|---|---|---|---|---|---|---|
Scrotal circumference | Window size | 16 | 8 | 20 | 7 | 40 | 15 |
Accuracy | 0.43 ± 0.07 | 0.42 ± 0.07 | 0.43 ± 0.09 | 0.41 ± 0.06 | 0.42 ± 0.07 | 0.39 ± 0.06 | |
G accuracy | 0.38 ± 0.07 | ||||||
Age at puberty | Window size | 7 | 7 | 7 | 8 | 11 | 11 |
Accuracy | 0.33 ± 0.17 | 0.33 ± 0.17 | 0.33 ± 0.18 | 0.33 ± 0.19 | 0.36 ± 0.17 | 0.36 ± 0.17 | |
G accuracy | 0.31 ± 15 | ||||||
Weight at first corpus luteum | Window size | 11 | 7 | 4 | 2 | 5 | 3 |
Accuracy | 0.42 ± 0.15 | 0.40 ± 0.15 | 0.41 ± 0.13 | 0.40 ± 0.14 | 0.42 ± 0.11 | 0.37 ± 0.14 | |
G accuracy | 0.40 ± 14 |