Table 2 SNPs in candidate genes significantly associated with TeW and TeP
From: TCF21 is related to testis growth and development in broiler chickens
SNP | Chr | Position | P value (TeW) | P value (TeP) | Candidate gene | Gene position (Mb) |
|---|---|---|---|---|---|---|
Gga_rs14364352 | 3 | 59,757,561 | 5.13E−07 | 1.81E−07 | MAP7 | 56.99–57.10 |
TCF21 | 58.22–58.22 | |||||
EPB41L2 | 59.61–59.68 | |||||
Gga_rs14364587 | 3 | 60,099,912 | 8.98E−08 | 1.15E−08 | – | – |
Gga_rs14705827 | 3 | 60,784,548 | 3.22E−07 | 3.73E−07 | – | – |
GGaluGA224607 | 3 | 61,317,809 | 3.66E−07 | 4.53E−07 | – | – |
Gga_rs14365191 | 3 | 61,522,182 | 2.25E−07 | 3.66E−07 | – | – |
GGaluGA224679 | 3 | 61,526,696 | 1.33E−07 | 2.42E−07 | – | – |
Gga_rs16286755 | 3 | 64020868 | 2.58E−08 | 4.14E−08 | GJA1 | 64.41–64.42 |
Gga_rs16287113 | 3 | 64,522,837 | 2.26E−07 | 9.13E−07 | – | – |
GGaluGA225462 | 3 | 65,388,568 | 1.61E−07 | 3.83E−07 | GPRC6A | 66.36–66.37 |
Gga_rs14748077 | 10 | 8,478,019 | 9.78E−07 | 3.53E−07 | – | – |
GGaluGA068209 | 10 | 8,928,839 | 5.14E−07 | 1.68E−07 | TEX9 | 8.70–8.75 |
GGaluGA068594 | 10 | 10,330,735 | 5.89E−07 | 3.80E−07 | – | – |
GGaluGA068660 | 10 | 10,573,304 | 3.95E−08 | 1.70E−08 | CYP19A1 | 10.55–10.57 |
GGaluGA068662 | 10 | 10,607,832 | 3.66E−08 | 7.77E−09 | – | – |
Gga_rs14703430 | 10 | 10,647,843 | 2.90E−10 | 4.89E−11 | – | – |
Gga_rs14005067 | 10 | 10,742,112 | 1.91E−06 | 5.06E−07 | – | – |
Gga_rs14946630 | 10 | 10,792,181 | 1.92E−10 | 2.11E−11 | – | – |
Gga_rs15575830 | 10 | 11,983,111 | 1.33E−06 | 4.90E−07 | – | – |
Gga_rs15575901 | 10 | 12,159,992 | 6.91E−07 | 2.48E−07 | – | – |
Gga_rs14947056 | 10 | 12,323,517 | 6.91E−07 | 2.48E−07 | – | – |
Gga_rs14005930 | 10 | 12,487,480 | 1.55E−08 | 4.47E−09 | PDE8A | 12.64–12.75 |
Gga_rs14006710 | 10 | 13,195,918 | 9.67E−08 | 1.72E−08 | SH3GL3 | 13.10–13.15 |