Putative enhancer sites in the bovine genome are enriched with variants affecting complex traits

Table 4 Degree of overlap between significant variants \(\left( {P \le 10^{ - 8} } \right)\) in the sets of bovine enhancers analysed

	VISTA (%)	FANTOM5 (%)	dbSUPER (%)	H3K4me3 (%)	H3K27Ac (%)
VISTA	100	31.25	50	0	0
FANTOM5	38.46^a	100	38.46	0	0
dbSUPER	9.88	6.17	100	0	1.23
H3K4me3	0	0	0	100	77.90
H3K27Ac	0	0	0.08	46.04	100

^aEach value in the table represents the ratio, expressed as a percentage, of the total overlapping variants \(\left( {P \le 10^{ - 8} } \right)\) between the two enhancer sets listed in a row and column, relative to the total number of significant variants in the enhancer set listed in the corresponding row

ISSN: 1297-9686