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Table 4 Measures of genetic diversity per genetic group

From: Genetic characterisation of the Connemara pony and the Warmblood horse using a within-breed clustering approach

Genetic group

Mean alternate allelic frequency (SD)

Mean HO (SD)

Mean HS (SD)

Mean FIS (SD)

C1

0.1909 (0.1276)

0.3819 (0.2552)

0.3025 (0.1742)

− 0.1978 (0.1592)

C2

0.1842 (0.1404)

0.3683 (0.2808)

0.2888 (0.1921)

− 0.2045 (0.1721)

C3

0.1876 (0.1347)

0.3752 (0.2694)

0.2925 (0.1837)

− 0.2100 (0.1591)

C4

0.1642 (0.1980)

0.3285 (0.3960)

0.2478 (0.2761)

− 0.3056 (0.4204)

W1

0.1801 (0.1823)

0.3602 (0.3646)

0.2643 (0.2416)

− 0.2978 (0.2736)

W2

0.1832 (0.1222)

0.3664 (0.2445)

0.2887 (0.1696)

− 0.2000 (0.1408)

W3

0.1826 (0.1424)

0.3651 (0.2849)

0.2819 (0.1936)

− 0.2192 (0.1761)

W4

0.1841 (0.1123)

0.3683 (0.2246)

0.2921 (0.1570)

− 0.1947 (0.1272)

  1. FIS values in italic indicate a p-value lower than 0.05 in a one-sample t-test, indicating that the FIS is significantly different from 0
  2. SD standard deviation, HO observed heterozygosity, HS within-population gene diversity, FIS Wright’s inbreeding coefficient by expected heterozygosity