Unravelling the genetic variability of host resilience to endo- and ectoparasites in Nellore commercial herds

Table 6 Description of the quantitative trait locus (QTL) defined from SNPs that were significantly associated with host resilience to Eimeria spp.

Chr	n	IP	FP	Genes inside QTL
4	11	116,439,784	117,037,674	DPP6^a, HTR5A^a, PAXIP^b, RF00006^c
6	14	90,646,323	91,785,192	CXCL9^a, CXCL10^a, CXCL11^a, NAAA^a, SCARB2^a, STBD1^a, ART3^b, CCDC158^b, NUP54^b, PPEF2^b, SDAD1^b, SHROOM3^b, SOWAHB^b, ENSBTAG00000004921^c, ENSBTAG00000032074^c, ENSBTAG00000050665^c, ENSBTAG00000053885^c, ENSBTAG00000054432^c, SEPT11^c, RF00003^c, RF00026^c
7	11	58,461,990	59,477,630	DPYSL3^a, SPINK1^a, SPINK5^a, JAKMIP2^b, SCGB3A2^b, SPINK6^b, STK32A^b, bta-mir-2284y-7^c, C7H5orf46^c, ENSBTAG00000052309^c, ENSBTAG00000053960^c, RF00026^c
12	17	83,457,070	84,943,864	COL4A1^a, IRS2^a, LIG4^a, TNFSF13B^a, ABHD13^b, MYO16^b, RF00001^c
13	39	70,341,842	71,369,326	PTPRT^a, ENSBTAG00000002446^c, RF00026^c

Genes marked with ^awere prioritized in the candidate gene prioritization analyses, ^bwere included in the analyses but not prioritized, and genes with ^cwere not included in the prioritization analyses
Chr chromosome, n number of SNPs within the QTL, IP initial position, FP final position

ISSN: 1297-9686