Fig. 1
From: A cautionary tale of low-pass sequencing and imputation with respect to haplotype accuracy
Sequencing depth versus breadth of genome coverage and genotype discordance. a Depth of coverage is plotted against breadth of coverage for Labrador retriever autosomes from each sequencing depth. The shift in breadth of coverage observed at all depths is associated with the inability to map to unresolved regions of the assembly on chromosome 26 (e.g. 26:25818821–26738102). b Pre-imputation genotype discordance for genotypes calculated at each sequencing depth relative to genotypes calculated at 43.5X