Table 3 In silico prediction of TF target genes for high and low FA profiles, including potential regulators and their putative differentially expressed targets in BC1_DU pigs
Regulatory genes (n = 6) | Number of putative targets | Candidate target genes (n = 29) | |
|---|---|---|---|
Condition 1 (less SFA and MUFA, and more PUFA) | Condition 2 (more SFA and MUFA, and less PUFA) | ||
TADA2A | 15 | TBC1D16, TBKBP1, WNT5B, DHRS3, GADD45G, KCNT1, MAMSTR, PLPP7, SIX5 | TFRC, APCDD1, CARHSP1, GOT1, PLIN1, SOD3 |
CARHSP1 | 8 | DNAJB9, GOT1, MAFA, PLIN1, TFRC, ADIPOQ | FBXO6, TADA2A |
SIX5 | 5 | TADA2A, FBXO6, GADD45G | FGFR4, GALNT15 |
PAX7 | 9 | PLPP7, TENT5C, GALNT15, GOT1, MAFA | WNT5B, ADIPOQ, FBXO6, NEU3 |
MAFA | 8 | PAX7, TFRC, CARHSP1, DHRS3, FBXO6, FGFR4, GADD45G | PLIN1 |
LBX1 | 3 | FBXO6, GALNT15 | TBKBP1 |