Table 1 Numbers of individuals and SNPs available after quality control that were used to phase the HD genotypes of the females under study that belonged to parental cohorts
Line | Status of the individuals | Number of individuals | Number of SNPs used |
|---|---|---|---|
LB | Parents | 288 | 571,319 |
Offspring | 1297 | 29,091 | |
LC | Parents | 173 | 569,03 |
Offspring | 1350 | 30,379 | |
SY | Parents (dams + 1 sire) | 16 | 569,03 |
Offspring (+ 8 sires) | 866 | 32,725 |