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Table 1 Simulation and estimation scenarios

From: Uncertainty in the mating strategy of honeybees causes bias and unreliability in the estimates of genetic parameters

Simulation scenarios

Estimation scenarios

Set

Mating strategy

Sire modeling

Controlled mating of BQs

Open mating of DPQs

Controlled mating of BQs

Open mating of DPQs

I

SS

Homogeneous open mating drone population

C_SSP

O_PSP

C_dummySSP/DPQdam

C_dummySSP/Q

C_PSP

PS

C_SSP

O_PSP

C_dummySSP/DPQdam

C_dummySSP/Q

C_PSP

II

SS

Heterogeneous open mating drone population

C_SSP

O_NoPheno

O_TwoPSP

O_FixedGroup

O_RandGroup

  1. Controlled mating strategy in the simulation: SS (single sire) and PS (pseudo-sire) mating
  2. Sire pedigree modeling for controlled mating: C_SSP, C_dummySSP/DPQdam, C_dummySSP/Q, C_PSP: in the pedigree, controlled mated queens are assigned, respectively, single sires, dummy single sires per dam of DPQ(s), dummy single sires per mated queen, pseudo-sires
  3. Sire modeling for open mating: O_NoPheno: open-mated DPQs’ colony phenotypes were excluded from the genetic analysis; O_PSP, O_TwoPSP: in the pedigree, open-mated DPQs are assigned, respectively, a single open-mating pseudo-sire, or one for each open-mating drone subpopulation (initial BQs and each half of the DPQ); O_FixedGroup or O_RandGroup: the effect of the drone subpopulation mating DPQs was accounted for by adding a fixed or a random non-genetic effect in the statistical model describing the phenotypes