Open Access

A gene-based radiation hybrid map of chicken microchromosome 14: Comparison to human and alignment to the assembled chicken sequence

  • Mireille Morisson1Email author,
  • Sophie Leroux1,
  • Carine Jiguet-Jiglaire1,
  • Sirine Assaf2,
  • Frédérique Pitel1,
  • Sandrine Lagarrigue2,
  • Suzanne Bardes1,
  • Katia Feve1,
  • Thomas Faraut1,
  • Denis Milan1 and
  • Alain Vignal1
Genetics Selection Evolution200537:229

https://doi.org/10.1186/1297-9686-37-3-229

Received: 3 May 2004

Accepted: 11 October 2004

Published: 15 March 2005

Abstract

We present a gene-based RH map of the chicken microchromosome GGA14, known to have synteny conservations with human chromosomal regions HSA16p13.3 and HSA17p11.2. Microsatellite markers from the genetic map were used to check the validity of the RH map and additional markers were developed from chicken EST data to yield comparative mapping data. A high rate of intra-chromosomal rearrangements was detected by comparison to the assembled human sequence. Finally, the alignment of the RH map to the assembled chicken sequence showed a small number of discordances, most of which involved the same region of the chromosome spanning between 40.5 and 75.9 cR6000 on the RH map.

Keywords

chicken comparative mapping radiation hybrids microchromosome 14 intrachromosomal rearrangement

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Authors’ Affiliations

(1)
Laboratoire de génétique cellulaire, Institut national de la recherche agronomique
(2)
Laboratoire de génétique animale, Institut national de la recherche agronomique, École nationale supérieure d'agronomie de Rennes

Copyright

© INRA, EDP Sciences 2005

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