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Table 2 Effect of Concentration Parameter (α) of the Dirichlet Process on Allele Origin Accuracy (AOAc), Similarity Index (If), and the average number of haplotype classes () for 1 replicate of populations M and Cross.

From: Haplotype inference in crossbred populations without pedigree information

  Population M Cross population
  α = 0.01 α = 0.1 α = 1 α = 10 α = 100 α = 0.01 α = 0.1 α = 1 α = 10 α = 100
AOAc       0.98 0.98 0.98 0.98 0.97
If 0.91 0.91 0.93 0.93 0.92 0.94 0.94 0.94 0.94 0.91
18 18 18 19 27 47 47 47 49 67
  1. Analyses were run assuming crossbreeding and populations M, F and Cross were used in the analyses. Base populations for M and F were simulated with Minor Allele Frequency equal to 0.40.