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Table 2 Significance of differences in accuracies between all SNP models

From: Accuracy of multi-trait genomic selection using different methods

Model

Scenario

rg1

Trait

G vs. BCπ0

G vs. BSSVS

BCπ0 vs. BSSVS

ST

1

 

1

***

***

 
 

1

0.25

2

   
 

1

0.54

2

   
 

1

0.75

2

   
 

2

 

1

   
 

2

0.25

2

   
 

2

0.54

2

   
 

2

0.75

2

   

MT

1

0.25

1

***

***

***

 

1

0.54

1

***

***

***

 

1

0.75

1

***

***

***

 

1

0.25

2

***

***

*

 

1

0.54

2

***

***

*

 

1

0.75

2

***

***

*

 

2

0.25

1

***

***

 
 

2

0.54

1

***

***

**

 

2

0.75

1

***

***

**

 

2

0.25

2

***

***

 
 

2

0.54

2

***

***

 
 

2

0.75

2

***

***

 
  1. Comparisons are between ST and MT models for animals without any phenotypes (generation 3) between pairwise SNP-based models across scenarios, genetic correlations (rg), and traits
  2. 1Phenotypes for trait 1 were the same across genetic correlations, and therefore analyzed only once with each ST model; *** P-value < 0.001, ** P-value < 0.01, * P-value < 0.05
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Genetics Selection Evolution

ISSN: 1297-9686