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Table 4 Estimates of the proportion of markers with zero effects (x100 ± SD) from the Bayesian variable selection model with starting values of 0.1 (π = 0.1) or 0.99 (π = 0.99)

From: Breeding value prediction for production traits in layer chickens using pedigree or genomic relationships in a reduced animal model

 

Early selection

Trait

ePD

eEW

ePS

eAH

eCO

eYW

eE3

eC3

π = 0.1 ± SD

34 ± 19

98 ± 0

33 ± 20

42 ± 32

90 ± 5

60 ± 29

98 ± 0

48 ± 29

π = 0.99 ± SD

21 ± 21

98 ± 0

58 ± 27

71 ± 20

91 ± 3

45 ± 25

98 ± 1

60 ± 26

Trait

lPD

lEW

lPS

lAH

lCO

lYW

lBW

eSM

π = 0.1 ± SD

19 ± 17

99 ± 0

42 ± 27

37 ± 31

38 ± 23

36 ± 16

99 ± 3

33 ± 24

π = 0.99 ± SD

34 ± 25

99 ± 0

49 ± 30

30 ± 21

56 ± 30

90 ± 9

99 ± 3

58 ± 27

 

Late selection

Trait

ePD

eEW

ePS

eAH

eCO

eYW

eE3

eC3

π = 0.1 ± SD

38 ± 28

98 ± 0

40 ± 22

82 ± 9

92 ± 4

64 ± 24

97 ± 1

69 ± 16

π = 0.99 ± SD

36 ± 21

98 ± 1

35 ± 22

51 ± 29

92 ± 3

39 ± 20

97 ± 1

52 ± 33

Trait

lPD

lEW

lPS

lAH

lCO

lYW

lBW

eSM

π = 0.1 ± SD

36 ± 17

98 ± 0

41 ± 24

59 ± 26

40 ± 22

43 ± 32

99 ± 2

48 ± 23

π = 0.99 ± SD

49 ± 31

98 ± 1

24 ± 21

41 ± 27

45 ± 20

57 ± 28

99 ± 2

32 ± 19

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Genetics Selection Evolution

ISSN: 1297-9686