Figure 1

Illustration of the definition of${\mathit{c}}_{\mathit{h},\mathit{i}}^{\mathit{m}}\left(\mathit{k}\right)$for imputation of maternally inherited alleles. Haplotype i is the maternal haplotype of the individual; haplotype h is one of the haplotypes from the haplotype library that is to be scored; for a specified value of k (k = 0, 1, 2, 3, 4), the number $c_{h,i}^m\left(k\right)$ of markers for which there were exactly k haplotype conflicts in the interval between the respective marker allele and marker m was calculated; with respect to marker m, the number of markers with k = 0 conflict is $c_{h,i}^m\left(0\right)=6$; for k = 1, 2, 3, 4, the numbers of markers with k conflicts are $c_{h,i}^m\left(1\right)=5$, $c_{h,i}^m\left(2\right)=5$, $c_{h,i}^m\left(3\right)=3$, and $c_{h,i}^m\left(4\right)=3$, respectively.