Analysis of conservation priorities of Iberoamerican cattle based on autosomal microsatellite markers

Table 3 Analyses of conservation priorities of Creole cattle breeds

Group	Breed	MEKs	f _m	WLM	WLMM	PC_He	PC_Weitz	¹PC_Fst	PC_5:1
Creole1	CRA	0	0	0	0.012	-0.320	4.97	0.141	4.087
Creole1	PAT	0	0	0	0.011	-0.359	5.95	0.190	4.896
Creole1	CAR	0.046	0.067	0	0.042	-0.145	5.39	0.337	4.466
Creole1	CRU	0	0	0	0.014	-0.338	5.28	0.151	4.342
Creole2	BON	0	0	0	0	-0.222	3.67	0.116	3.020
Creole2	HVA	0	0	0	0.028	0.226	1.19	0.310	1.029
Creole2	LUC	0	0	0	0.026	-0.117	3.40	0.189	2.813
Creole2	PCH	0.109	0.105	0.116	0.048	0.165	2.35	0.355	1.985
Creole3	CCC	0	0	0	0.019	-0.357	5.38	0.143	4.422
Creole3	RMS	0.033	0.054	0.009	0.034	-0.366	6.18	0.203	5.087
Creole4	GUA	0.011	0.039	0.003	0.034	-0.411	9.88	0.484	8.161
Creole4	GYM	0	0	0	0.025	0.085	2.67	0.310	2.238
Creole5	SMA	0	0	0	0.011	-0.093	3.38	0.209	2.800
Creole5	CBC	0	0	0	0.028	0.110	1.98	0.272	1.668
Creole5	CHU	0	0	0.005	0.037	0.196	1.09	0.273	0.941
Creole5	CNY	0.063	0.066	0	0.045	0.252	1.78	0.385	1.525
Creole5	CPO	0.167	0.100	0.052	0.038	0.180	1.52	0.297	1.296
Creole5	TLH	0	0	0	0.015	0.002	1.70	0.150	1.416
Creole6	CAQ	0.046	0	0	0.034	0.249	1.29	0.340	1.116
Creole6	CAS	0	n.	0.431	0.107	0.138	1.88	0.290	1.589
Creole6	CHS	0.028	0.016	0	0.035	0.192	2.32	0.378	1.965
Creole6	VEL	0.063	0.069	0.016	0.056	0.157	3.08	0.411	2.592
Creole6	CUB	0.124	0.114	0.123	0.076	0.113	3.96	0.448	3.318
Creole6	SIB	0.215	0.251	0.214	0.092	0.120	5.40	0.579	4.518
Creole6	ECU	0.096	0.084	0.032	0.056	0.168	2.51	0.372	2.119
Creole6	CHI	0	0.033	0	0.042	0.222	1.91	0.369	1.628
Creole6	PIL	0	0	0	0.037	0.152	1.69	0.286	1.433

Contributions of 27 breeds to overall genetic diversity of Creole cattle according to: marker-estimated kinships (MEK), average coancestries (f_m), weighted log-linear model (WLM), weighted log-linear mixed model (WLMM), Weitzman formula (PC_Weitz), proportional variation of expected heterozygosity (PC_He), aggregate diversity (PC_Fst), and the Piyasatian and Kinghorn formula (PC_5:1); values for the five breeds with the highest contributions are shown in bold; geographical breed groups and breed acronyms are defined in Table 1; ¹aggregate diversity was calculated as: PC_Fst = PC_Weitz*0.087+PC_He*0.913; n = not applicable.

ISSN: 1297-9686