Table 4 Statistical significance (p-values) of associations of single nucleotide polymorphisms within the 1 Mb region on chromosome 4 after accounting for the effects of SNP WUR10000125 ¹

1

MARC0005129

139136697

0.28

0.75

0.94

2

MARC0072497

139169386

0.27

0.68

0.7

3

ALGA0029505

139182285

0.27

0.52

0.95

4

ASGA0023314

139260674

0.79

0.62

0.10

5

MARC0027457

139409628

-

Fixed

6

MARC0095662

139440014

-

Fixed

7

ALGA0029510

139460508

0.35

0.18

0.76

8

INRA0017729

139501559

0.96

0.52

< 0.01

9

ASGA0023322

139599067

0.75

0.65

0.7

10

MARC0056249

139642883

1.00

LD = 1

11

WUR10000125

139666759

-

Used in model

12

ALGA0029524

139694323

0.95

0.91

0.163

13

H3GA0014860

139717541

0.11

0.41

0.64

14

ASGA0023335

139739837

0.94

0.08

0.11

15

ASGA0023344

139772783

1.00

LD = 1

16

MARC0014819

139800473

1.00

LD = 1

17

ALGA0029534

139823807

0.94

0.08

0.11

18

M1GA0006779

139861417

0.17

0.39

0.92

19

ASGA0023349

139875297

0.94

0.03

0.39

20

ALGA0029538

139943624

0.94

0.03

0.37

21

ASGA0023354

139973857

0.90

0.41

0.81

22

ASGA0023355

139989537

0.19

0.17

0.57

23

DRGA0005385

140011063

0.90

0.41

0.81

24

MARC0045227

140028977

0.16

0.97

0.91

25

ASGA0023369

140054732

0.04

0.62

0.72

26

M1GA0006784

140077330

0.72

0.61

0.79

27

M1GA0006785

140099804

0.04

0.97

0.96

28

M1GA0006789

140161976

0.12

0.71

0.73

29

ALGA0029567

140216349

0.08

0.07

0.82

30

MARC0000425

140220490

0.71

0.93

0.83

31

MARC0071762

140288666

0.19

0.06

0.4

32

H3GA0014885

140337996

0.15

0.98

0.96

33

ALGA0029569

140352057

0.30

0.64

0.74

34

ASGA0023397

140379843

0.64

0.81

0.94

35

ALGA0029576

140394822

0.34

0.89

0.29

36

MARC0040196

140420778

0.64

0.81

0.95