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Table 5 Haplotypes for the 487 kb region (with arbitrary numbers corresponding to the phylogenetic tree in Figure 3 ) that contain the B allele for SNP WUR10000125 on chromosome 4, along with the SNP sequence and the number of copies present in trials 1 through 8

From: Genome-wide association and genomic prediction for host response to porcine reproductive and respiratory syndrome virus infection

Haplotype number

Haplotype SNP sequence1

Number of copies

Trials in which the haplotype was present

17B

GAGG CGAGGGCCCAG

423

All

18B

GAGG CGCGGACAACG

21

5

19B

GAGG CGCGGACCCCG

1

1

15B

AGGG CGAGGGCCCAG

8

6

  1. 1Letter in bold is SNP WUR10000125.