Table 1 Significant SNPs affecting BF FA composition (FDR = 0.05) in an association study with 470 animals of the F 2 generation
From: New insight into the SSC8 genetic determination of fatty acid composition in pigs
Trait | Chromosomal region (Mb) | SNP | LR | P-value | a(SE) |
|---|---|---|---|---|---|
C14:0 | 93.79 | ALGA0048597 | 17.2127 | 3.34E-05 | 0.042 (0.019) |
117.55 | ALGA0049135 | 18.7843 | 1.46E-05 | 0.055 (0.016) | |
C16:0 | 93.72 | ALGA0048594 | 32.4610 | 1.22E-08 | 0.573 (0.881) |
117.66 | ALGA0049139 | 48.1404 | 3.97E-12 | 0.599 (0.871) | |
C18:0 | 91.56 | H3GA0025111 | 11.7215 | 6.18E-04 | -0.254 (0.630) |
119.851 | INRA0030422 | 20.6040 | 5.65E-06 | -0.366 (0.616) | |
C16:1(n-7) | 91.56 | H3GA0025111 | 42.9598 | 5.59E-11 | 0.163 (0.082) |
119.851 | INRA0030422 | 71.7870 | 1.11E-18 | 0.223 (0.082) | |
C18:1(n-9) | 93.66 | ALGA0048589 | 22.4009 | 2.21E-06 | -0.651 (1.589) |
117.66 | ALGA0049139 | 33.1059 | 8.73E-09 | -0.672 (1.571) | |
C20:2(n-6) | 94.73 | MARC0097057 | 23.1170 | 1.52E-06 | -0.032 (0.017) |
117.55 | ALGA0049135 | 23.9259 | 1.00E-06 | -0.039 (0.017) | |
ACL | 93.72 | ALGA0048594 | 46.5350 | 9.00E-12 | -0.020 (0.001) |
117.66 | ALGA0049139 | 71.4236 | 1.11E-16 | -0.021 (0.001) | |
C16:1(n-7)/C16:0 | 91.56 | H3GA0025111 | 22.7521 | 1.84E-06 | 0.006 (0.000) |
119.851 | INRA0030422 | 37.4524 | 9.37E-10 | 0.008 (0.000) | |
C18:0/C16:0 | 91.56 | H3GA0025111 | 47.8703 | 4.55E-12 | -0.023 (0.002) |
119.851 | INRA0030422 | 76.1635 | 1.11E-16 | -0.032 (0.002) | |
C18:1(n-7)/C16:1(n-7) | 93.72 | ALGA0048594 | 32.8062 | 1.02E-08 | -0.076 (0.016) |
119.851 | INRA0030422 | 61.0692 | 5.55E-15 | -0.089 (0.015) | |
C20:2(n-6)/C18:2(n-6) | 120.99 | ALGA0049254 | 13.8456 | 1.98E-04 | -0.003 (0.000) |