Table 2 Mean and standard error of the accuracies and biases of GEBV prediction for populations with different thresholds of MAF for markers and QTL in Data II

> 0

> 0

0.600 _{± 0.009}

0.570 _{± 0.010}

0.582 _{± 0.011}

0.579 _{± 0.011}

> 0.10

< 0.10

0.466 _{± 0.013}

0.457 _{± 0.012}

0.425 _{± 0.012}

0.424 _{± 0.012}

> 0.10

> 0

0.603 _{± 0.008}

0.571 _{± 0.009}

0.597 _{± 0.009}

0.594 _{± 0.009}

> 0

< 0.10

0.533 _{± 0.016}

0.528 _{± 0.016}

0.496 _{± 0.017}

0.490 _{± 0.017}

> 0.15

< 0.05

0.406 _{± 0.015}

0.395 _{± 0.016}

0.369 _{± 0.015}

0.368 _{± 0.015}

> 0

> 0

1.101 _{± 0.041}

1.055 _{± 0.037}

1.114 _{± 0.045}

1.137 _{± 0.051}

> 0.10

< 0.10

1.327 _{± 0.149}

1.357 _{± 0.131}

1.364 _{± 0.153}

1.393 _{± 0.170}

> 0.10

> 0

0.961 _{± 0.026}

0.983 _{± 0.033}

0.955 _{± 0.030}

0.948 _{± 0.030}

> 0

< 0.10

1.140 _{± 0.052}

1.110 _{± 0.049}

1.157 _{± 0.056}

1.225 _{± 0.064}

> 0.15

< 0.05

1.479 _{± 0.215}

1.795 _{± 0.356}

1.776 _{± 0.286}

1.728 _{± 0.271}