Figure 2
From: Sexually dimorphic genetic architecture of complex traits in a large-scale F2 cross in pigs
Identification of sexually dimorphic loci using a sex-stratified GWAS. (A) Manhattan plot of sex-specific signals; the significance of the sex-specific effects (-log10P value) were plotted against the loci’s genomic positions. The dashed and solid horizontal lines represent suggestive and genome-wide significance thresholds. (B) and (D) Regional plots of GWAS signals on chromosome 6 for males (B) and females (D). (C) and (D) Distribution of phenotypic values for the three SNP genotypes most associated with the longissimus muscle hue angle values in males (C) and females (E).